Machine learning

A Decoy-Free Approach to the Identification of Peptides

A growing number of proteogenomics and metaproteomics studies indicate potential limitations of the application of the decoy database paradigm used to separate correct peptide identifications from incorrect ones in traditional shotgun proteomics. We therefore propose a binary classifier called Nokoi that allows fast yet reliable decoy-free separation of correct from incorrect peptide-to-spectrum matches (PSMs).

Mar/23 09:00 - Mar/27 18:00
Amsterdam, The Netherlands

NBIC/BioSB Course Pattern Recognition (4th edition)

The course aims at PhD students with a background in bioinformatics, computer science or a related field. The course introduces basic techniques from the fields of pattern recognition and machine learning to solve bioinformatics problems. After having followed this course, a student should have an overview of basic pattern recognition techniques and be able to recognize what method is most applicable to classification problems (s)he encounters in bioinformatics applications.


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