NGS

EVORhA

EVORhA (Evolutionary Reconstruction of Haplotypes) is a quasi-species assembly method that allows reconstructing from short-read sequence data of a bacterial population, the haplotypes occurring in that population and the frequencies at which they occur. EVORhA can be used amongst others to reconstruct genome-wide haplotypes obtained from a mixed bacterial infection or to reconstruct the population dynamics of an evolving bacterial population from pooled sequence data.

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